Pipelines Articles

Pipelines DevOps

Setting up NF Core with MicroK8s

A step-by-step guide on setting up and running Nextflow workflows on a MicroK8s Kubernetes cluster, demonstrating how to leverage Terraform provisioning, persistent storage, and containerized execution to enable scalable, reproducible scientific data analysis, including executing NF Core pipelines for streamlined bioinformatics and genomics research.

Pipelines DevOps

Use Case: The Galaxy Project

A step-by-step guide to deploying the Galaxy Project, a scalable, web-based computational workbench for scientific workflows, on an AWS EC2 instance using Terraform, Kubernetes, Helm, and CVMFS, enabling researchers to efficiently analyze complex datasets in a cloud-based environment.